Docs tagged “recipes”
16 Ivy Biosciences docs pages tagged recipes.
- Analyze Single-Cell Data
Analyze Single-Cell Data: a genomics recipe chaining scanpy.
- Annotate Metabolome
Annotate Metabolome: an omics recipe chaining metabolomics, metabolomics.
- Compound safety profile
Whether a compound is safe enough to advance — off-targets, interactions, and toxicology in one pass.
- Discover Targets From Omics
Discover Targets From Omics: an analysis recipe chaining scanpy.
- Filter Compounds For Drug-Likeness
Filter Compounds For Drug-Likeness: a medchem recipe chaining admet_ai.
- Find Binding Motifs
Find Binding Motifs: an epigenomics recipe chaining epigenomics.
- Find Clinical Trials
Find Clinical Trials: a clinical recipe chaining clinical_trials.
- Fold, find pockets, dock, triage
From a protein sequence to a druggable pocket with a verified docking pose and an ADMET read — the standard structure-first entry point.
- Head-to-head safety comparison
Compare two or three drugs on off-targets, real-world adverse-event signals, and pharmacogenomics in one pass.
- Hit to lead
Dock a hit against a target, rescore the pose, screen ADMET, plan a synthesis route, and check vendor availability — the hit-to-lead pass.
- Screen ADMET
Screen ADMET: a screening recipe chaining admet_ai, deeppurpose.
- Search Compounds
Search Compounds: a data recipe chaining pubchem, chembl.
- Target to lead
Take a target from structure to a druggable, synthesizable starting point.
- Triage a compound series
Rank a series by drug-likeness and ADMET before committing chemistry time to it.
- Workflow Recipes
Step-by-step drug discovery tutorials combining multiple CLI commands into complete workflows.
- Workflows
End-to-end drug discovery workflows and copy-and-adapt prompt recipes, grouped by goal, each naming the tool chain it runs.